Grant-Funded Researcher - Adelaide Centre for Epigenetics @ SA

Position title: Grant-Funded Researcher - Adelaide Centre for Epigenetics

Employer: University of Adelaide

Closing date: 22nd January 2023

Brief position description: Two exciting fixed term full time opportunities available in the newly established Adelaide Centre for Epigenetics (ACE) available for 3 years.

Two bioinformatic positions are available to work within Professor Jose Polo’s group in the recently established Adelaide Centre for Epigenetics (ACE). These opportunities are for high achieving postdoctoral researchers to join the recently relocated Polo group in a collaborative framework in the application and development of new computational methods for the analysis of single cell, spatial Omics, and epigenomics data. ACE is a newly established centre within the Faculty of Health and Medical Sciences focusing on epigenetic research and cell fate, which will include research in development, reprogramming and cancer. The Adelaide Centre for Epigenetics is associated with the recently established South Australian immunoGENomics Cancer Institute (SAiGENCI) which will be the state’s world class cancer research institute.

Job website:http://careers.adelaide.edu.au/cw/en/job/511096/grantfunded-researcher-b

Contact name: Sandii Constable

Contact email: sandii.constable@adelaide.edu.au

Bioinformatician @ VIC

Position title: Bioinformatician

Employer: St Vincent's Institute of Medical Research

Closing date: 30/11/2022

Brief position description: The Bioinformatics and Cellular Genomics group at St Vincent’s Institute of Medical Research SVI (St Vincent’s Institute) seeks an individual to join our diverse research team. We are broadly interested in all the ways in which computational approaches can drive biological discovery. We develop methods and software for the analysis of large-scale biomedical data from imaging and sequencing technologies, particularly single-cell data. We work closely with a wide range of collaborators to contribute computational expertise to studies motivated by specific biologically focused questions.
For further details about this opportunity please visit our website or the SEEK advert.
https://www.svi.edu.au/careers_students/

Job website: http://www.seek.com.au/job/59236536

Contact name: Heather Dawson

Contact email: hdawson@svi.edu.au


CSIRO Postdoctoral Fellowship in Digital Pandemic Preparedness

Position title: CSIRO Postdoctoral Fellowship in Digital Pandemic Preparedness

Employer: CSIRO

Closing date: 12 December 2022

Brief position description: The Australian e-health research centre (AEHRC) is CSIRO’s digital health research unit delivering innovation to the health system. It is the largest eHealth research group in Australia with more than 100 research scientists working with clinicians and industry to identify the clinical and/or health challenges. AEHRC is worldwide and unique in covering the full value chain from basic science through to clinical application and assessing their impacts on Australian and international health systems.

Within the AEHRC, the charter of the Transformational Bioinformatics Group is to develop novel bioinformatics solutions for research and industry using the latest in cloud and BigData infrastructure.

The Postdoctoral Fellow will join this group from the AEHRC and collaborate closely with both other researchers from CSIRO and external collaborators to drive research into and develop new models and methods for pathogen surveillance. The candidate will lead work into understanding what factors drive pathogen evolution and how these changes impact disease progression and outcome.

Job website: http://jobs.csiro.au/job/Negotiable-CSIRO-Postdoctoral-Fellowship-in-Digital-Pandemic-Preparedness/924744600/

Contact name: Laurence Wilson

Contact email: laurence.wilson@csiro.au

Lecturer/Senior Lecturer in Cell and Molecular Bioscience (Continuing, full-time appointment)

Position title: Lecturer/Senior Lecturer in Cell and Molecular Bioscience (Continuing, full-time appointment)

Employer: University of Wollongong

Closing date: Tuesday 14 February 2023, 11:59 PM

Brief position description: The School of Chemistry and Molecular Bioscience at the University of Wollongong is seeking to recruit a highly motivated and successful individual to conduct independent, high-quality research and quality teaching primarily in the area of Bioinformatics/Computational Biology as it relates to the fields of Biochemistry, Microbiology, Molecular Biophysics, and/or Cell and Molecular Biology.

Whilst all areas of expertise will be considered, candidates with the ability to develop a research program that capitalises on the existing world-class infrastructure at the University of Wollongong, as well as the capacity to apply bioinformatics and computational biology approaches across various “omics” technologies and other forms of high-content data is highly desirable.

See more details at https://ejgl.fa.ap1.oraclecloud.com/hcmUI/CandidateExperience/en/sites/CX_1/requisitions/preview/2998

Job website: http://ejgl.fa.ap1.oraclecloud.com/hcmUI/CandidateExperience/en/sites/CX_1/requisitions/preview/2998

Contact name: Adam Trevitt

Contact email: scmb-admin@uow.edu.au

Computational Biologist

Position title: Computational Biologist

Employer: Telethon Kids Institute

Closing date: 22.11.22

Brief position description: We are now seeking a talented Computational Biologist to join our rare disease and precision health program. The focus of this role is to accelerate the adoption of genomic medicine approaches in healthcare through the application of machine learning and artificial intelligence techniques.

Job website: http://www.seek.com.au/job/59118589

Contact name: Timo Lassmann

Contact email: timo.lassmann@telethonkids.org.au

Genomic Scientist

Position title: Genomic Scientist

Employer: Sequins (Australia)

Closing date: 30/11/2022

Brief position description: INNOVATIVE OPPORTUNITY IN GENOMICS

• Join a start-up team backed by venture capital funding
• Work closely with the founding scientist, A/Prof Tim Mercer
• Unique opportunity for cutting edge research with commercialisation

Become a part of a fast-paced biotechnology start-up developing innovative solutions to improve the quality of genome sequencing and clinical diagnostics.


ABOUT US
Sequins core technologies include a widely published program originating at the Garvan Institute of Medical Research (in Sydney). The platform combines synthetic spike-in DNA and RNA controls with bioinformatic software used during genome sequencing to increase the accuracy, performance, and quality of genomic data.


With your experience developing and using bioinformatic tools for clinical genomics and exposure to diagnostic platforms, you will collaborate with industry and production partners, and provide hands-on support implementing and shaping the Sequins platform.


ABOUT YOU
You are a motivated and talented scientist wanting to be an early and foundational member of a team at the forefront of genomics technologies. You are also a problem solver with a meticulous attention to detail and keen observation skills. With genomic and bioinformatic knowledge and laboratory experience, you will contribute to the development of new controls and pipelines for genomic sequencing applications while working with other smart, ambitious individuals.


ESSENTIAL CRITERIA
· Strong verbal and written communication skills
· Understanding of genomics and personalised medicine
· Experience with bioinformatics, NGS protocols and analysis of next-generation sequencing data
· Ability to work effectively both autonomously and as part of a team
· Enthusiastic and innovative in approaching new challenges

DESIRABLE
· Proficiency with programming (Python) and source code management
· Demonstrated genomic analysis experience, including relevant software and bioinformatics tools
· Experience with process development, method validation, and document management and control (including version status, approval, and document review)
· Experience in using and managing high-performance computing
· Understanding of clinical diagnostics and clinical interpretation of genomics data
· PhD in related disciplines.


KEY RESPONSIBILITIES
· Analysing and interpreting next-generation (genome) sequencing data (for example GATK, MuTect)
· Designing new synthetic genome (DNA and RNA) controls according to product specifications, using Sequins technology and contributing to its further development
· Preparing reports, procedures, and processes to support the design and use of synthetic DNA products and genome sequencing
· Researching and innovating in new synthetic genome controls
· Supporting the company’s broader research and development efforts, including process and quality improvement, method validation and establishment of new services
· Engaging and supporting external technical scientists
· Collaborating with a dynamic team to develop new genomic products
· Documenting workflows and process development
· Providing technical project management and reporting

BENEFITS ON OFFER
· A full-time role with a base salary in the range of $100K-150K AUD plus superannuation and benefits
· Work with cutting edge technology and the scientists behind high-impact publications
· Flexible work arrangements
· Playing a fundamental role in developing new biotechnologies for genomic testing
· Participation in the company Equity Incentive Plan.
· On-going training and development nationally and internationally
· Opportunities for interstate and international travel

Job website: http://sequins.bio

Contact name: David Barda

Contact email: david.barda@sequins.bio

Bioinformatics Research Officer (OceanOmics Centre) @ WA

Position title: Bioinformatics Research Officer (OceanOmics Centre)

Employer: University of Western Australia

Closing date: 10 November 2022

Brief position description: We have two full time bioinformatics positions (Level 5 or Level 6) to support an ambitious marine genomics program to build a world-leading marine vertebrate reference genome library to support ocean conservation.

About the team
The Minderoo OceanOmics Centre at UWA combines a joint Ocean Genomes Laboratory, an OceanOmics Laboratory, and Computational Biology resources. Equipped with the latest high-throughput sequencing technology and in collaboration with national and global partners, the Ocean Genomes Laboratory will generate a comprehensive library of high-quality marine vertebrate reference genome assemblies. All such reference genome data will be subject to rigorous QA/QC and all assemblies will be released publicly with open access.

The Ocean Genomes Laboratory will undertake research and development under the direction of Minderoo’s ambitious OceanOmics Program which has the goal of revolutionising ocean conservation through novel marine sampling and genomics approaches and scaling these to significantly advance our knowledge of marine life. The Ocean Genomes Laboratory will include state of the art infrastructure including sample and eDNA preparation areas, flow cytometry, single cell sequencing equipment and the latest bioinformatics and computational biology tools.

About the opportunity
As the appointee you will, under general direction, support the development and implementation of bioinformatics tools and workflows for large-scale DNA sequencing and genome assembly of marine vertebrates, helping the centre assemble hundreds of platinum-level genomes with high-quality annotations. You will play a critical role in the quality control, security and sharing of genomic data. Appointments may be made at Level 5 or Level 6, commensurate with experience.

About you
You will have hands-on experience in genome assembly and/or developing large bioinformatics workflows, with drive to understand and protect marine biodiversity. The ideal candidate will have excellent attention to detail and a commitment to quality, reproducibility and clear documentation. You will have excellent organisations skills, able to juggle multiple projects, and work well in a diverse team with different backgrounds.

Follow the job URL below or get in touch for more information.

Job website: http://external.jobs.uwa.edu.au/cw/en/job/512865

Contact name: Rich Edwards

Contact email: rich.edwards@uwa.edu.au

Research Assistant @ VIC

Position title: Research Assistant

Employer: Peter MacCallum Cancer Centre

Closing date: 20 Novemeber 2022

Brief position description: Applications are invited to join an exciting research program within the Molecular Biomarkers and Translational Genomics Laboratory led by Sarah-Jane Dawson at the Peter MacCallum Cancer Centre (www.thedawsonlab.com). The research will explore the use of circulating tumour DNA to study genomic and transcriptional evolution and provide insights into treatment response and resistance in cancer.

This 1.0EFT position is for a research assistant to provide bioinformatics support for a variety of projects. The position will involve the analysis of large-scale genomic data, through the application of best-practice bioinformatics workflows and the development of innovative methods as required. The position will require a highly motivated bioinformatician or computational biologist to provide support for a variety of projects. The role will include the analysis of a range of next generation sequencing data, including targeted sequencing, whole genome sequencing, RNA sequencing and DNA methylation analysis. Applicants should have demonstrated experience developing and maintaining bioinformatics analysis workflows. Experience working with cloud computing, containers and version-controlled pipelines is desirable but not required.

The position will require a highly motivated and skilled bioinformatician or computational biologist with expertise in the analysis of next generation sequencing data, integration of genome-wide datasets, competency in programming languages R and/or Python/Perl and experience with working on a high-performance computing cluster. The individual will collaborate very closely with other bioinformaticians and cancer molecular biologists to work on joint initiatives.

The position will be in a research environment that includes a large and interactive group of bioinformaticians and computational biologists in the Computational Cancer Biology Program and the Bioinformatics Core Facility. The position will be initially for a fixed term of 12 months with the opportunity to extend. Remuneration will be commensurate with qualifications and experience.

Job website: http://careers.petermac.org/job/MELBOURNE-Research-Assistant-SJ-Dawson-Lab-VIC-3000/932787010/

Contact name: Dineika Chandrananda

Contact email: Dineika.Chandrananda@petermac.org

Research Assistant @ VIC

Position title: Research Assistant

Employer: Peter MacCallum Cancer Centre

Closing date: 18 November 2022

Brief position description: Applications are invited to join an exciting research program within Mark Dawson’s Laboratory (www.thedawsonlab.com)at the Peter MacCallum Cancer Centre. The research will explore the molecular mechanisms of clonal dominance in normal development and in cancer biology to provide insights into cell fate decisions, normal and malignant stem cell renewal, treatment response and resistance in cancer.

The position will involve the analysis of large-scale single cell data through the application of best-practice bioinformatics workflows and the development of innovative methods as required. The position will require a highly motivated bioinformatician or computational biologist to provide support for a variety of projects that build on innovative methods including SPLINTR (Fennell, Vassiliadis et al; Nature 2022). The role will include the analysis of a range of next generation sequencing data, including scRNA-seq, scChIP-seq, scATAC-seq and other emerging single cell platforms. The role requires competency in programming languages R and Python/Perl and will involve working on a high-performance computing cluster. The individual will collaborate very closely with other bioinformaticians, cancer cell and molecular biologists to work on joint initiatives.

The position will be in a research environment that includes a large and interactive group of bioinformaticians and computational biologists in the Computational Cancer Biology Program and the Bioinformatics Core Facility. The position will be initially for a fixed term of 12 months with the opportunity to extend. Remuneration will be commensurate with qualifications and experience.

Job website: http://careers.petermac.org/job/MELBOURNE-Research-Assistant-M-Dawson-Lab-VIC-3000/932662810/

Contact name: Enid Lam

Contact email: enid.lam@petermac.org


Post Doctoral Researcher @ VIC

Position title: Post Doctoral Researcher

Employer: Peter MacCallum Cancer Centre

Closing date: 18 November 2022

Brief position description: Applications are invited to join an exciting research program within the Molecular Biomarkers and Translational Genomics Laboratory led by Sarah-Jane Dawson at the Peter MacCallum Cancer Centre (www.thedawsonlab.com). The research will explore the use of circulating tumour DNA to study genomic and transcriptional evolution and provide insights into treatment response and resistance in cancer.

The position will involve the analysis of large-scale genomic data, with a focus on whole genome sequencing, through the application of best-practice bioinformatics workflows and the development of innovative new methods as required. Applicants should have demonstrated experience developing and maintaining bioinformatics analysis workflows. Experience working with cloud computing, containers and version-controlled pipelines is desirable but not required.

The position will require a highly motivated and skilled bioinformatician or computational biologist with expertise in the analysis of next generation sequencing data, integration of genome-wide datasets, competency in programming languages R and/or Python/Perl and experience with working on a high-performance computing cluster. The individual will be responsible for driving their own specified projects, but will also collaborate very closely with cancer molecular biologists to work on joint initiatives.

The position will be in a research environment that includes a large and interactive group of bioinformaticians and computational biologists in the Computational Cancer Biology Program and the Bioinformatics Core Facility. The position will be initially for a fixed term of 12 months with the opportunity to extend. Remuneration will be commensurate with qualifications and experience.

Job website:http://careers.petermac.org/job/MELBOURNE-Post-Doctoral-Researcher-Molecular-Biomarkers-and-Translational-Genomics-Laboratory-VIC-3000/932665510/

Contact name: Dineika Chandrananda

Contact email:Dineika.Chandrananda@petermac.org