Laboratory Head | Introducing a new Brain Cancer Centre @ VIC

Position title: Laboratory Head | Introducing a new Brain Cancer Centre

Employer: The Walter and Eliza Hall Institute of Medical Research (WEHI)

Closing date: 5pm, Tuesday 11 May 2021

Brief position description: Exciting opportunity for a talented Bioinformatician or Computational Biologist to establish an independent research laboratory in Brain Cancer Research at WEHI, collaborating closely with wet lab and clinical researchers. Full details including how to apply can be found using the link below.

Job website: https://www.wehi.edu.au/laboratory-head-employment-opportunities-introducing-new-brain-cancer-centre

Contact name: Melissa Davis

Contact email: davis.m@wehi.edu.au

CSIRO Postdoctoral Fellowship in Pathogen Genomics @ NSW

Position title: CSIRO Postdoctoral Fellowship in Pathogen Genomics

Employer: CSIRO

Closing date: 17th May 2021

Brief position description: The Opportunity

Do you have a PhD in Bioinformatics or Statistical Genetics?
Contribute to impactful research using cloud-based genome analytics
Join CSIRO - Australia’s premier science & technology research organisation

CSIRO Early Research Career (CERC) Postdoctoral Fellowships provide opportunities to scientists and engineers who have completed their doctorate and have less than three years of relevant postdoctoral work experience. These fellowships aim to develop the next generation of future leaders of the innovation system.

The Postdoctoral Fellow will be leading the development of platforms and dashboards for the curation and analysis of pathogen genomes, which allows tracking and surveillance to limit the spread of these agents amongst the population. Using new developments in serverless-cloud architecture developed by the AEHRC, these platforms will enable real-time analytics to inform data-driven intervention strategies.

Your duties will include:
Develop innovative concepts, theories, tools and techniques related to cloud-based genome analytics.
Combine phenotype and genomic data to enable better predictions of mutation outcomes.
Develop methods for tracking the spread of mutations throughout populations.
Partner with key stakeholders in the fields of pathogen genomics and genomic tracking to identify gaps in the market.

Job website: https://jobs.csiro.au/job/Sydney%2C-NSW-CSIRO-Postdoctoral-Fellowship-in-Pathogen-Genomics/733969600/

Contact name: Laurence Wilson

Contact email: laurence.wilson@csiro.au

Human Genomics Data Community Coordinator @ VIC

Position title: Human Genomics Data Community Coordinator

Employer: Murdoch Children's Research Institute

Closing date: 28 April 2021

Brief position description: A strategic national approach to genomic information management will be critical for Australia to capitalise on the potential of genomics, to both research and clinical practice. Australian Genomics and Australian BioCommons are committed to progress standardised, accessible and ethical use and reuse of human genomic data that advances clinical/scientific knowledge, and aligns with the expectations of data donors and the public.

The Human Genomics Data Community Coordinator will be a key driver of this activity in Australia: engaging with the genomic data community nationally and internationally; facilitating consultation, communication and education; promoting the evaluation and implementation of international data standards; and ensuring the alignment of key stakeholders for adoption and harmonisation of genomic data approaches.

Job website: https://career10.successfactors.com/career?career%5fns=job%5flisting&company=C0007531036P&navBarLevel=JOB%5fSEARCH&rcm%5fsite%5flocale=en%5fGB&career_job_req_id=26619&selected_lang=en_GB&jobAlertController_jobAlertId=&jobAlertController_jobAlertName=&_s.crb=aPM0cSVRvc%2f%2bo6MOAIdDL6JVfdEaKQMjbKoZ6%2bIIcRA%3d

Contact name: Tiffany Boughtwood

Contact email: tiffany.boughtwood@mcri.edu.au

Bioinformatics Laboratory Head @ VIC

Position title: Bioinformatics Laboratory Head

Employer: Walter & Eliza Hall Institute of Medical Research

Closing date: 16 June 2021

Brief position description: An opportunity is available for a Laboratory Head focused on bioinformatics and computational biology research to join the Bioinformatics Division within Australia’s pre-eminent biomedical research institute.

A faculty-level opportunity exists for an accomplished bioinformatician or computational biologist to join the Bioinformatics Division at the Walter and Eliza Hall Institute of Medical Research. The Division has a record of high-impact research in statistical bioinformatics, cancer genomics and systems biology including the creation of widely-used bioinformatics methodology. We are looking for a new laboratory head who will build on and complement existing strengths. This might include statistical bioinformatics and spatial omics but all areas of bioinformatics will be considered. A joint appointment with the Advanced Technology & Biology Division would be considered favourably depending on the interests of the candidate.

Full details and application process are described at:
https://www.wehi.edu.au/bioinformatics-laboratory-head

Job website: https://www.wehi.edu.au/bioinformatics-laboratory-head

Contact name: Gordon Smyth

Contact email: smyth@wehi.edu.au

Bioinformatics Officer @ VIC

Position title: Bioinformatics Officer

Employer: Peter MacCallum Cancer Centre

Closing date: 18/05/2021

Brief position description: We are seeking a Bioinformatics Officer with a graduate degree in Bioinformatics, Computational Biology, Systems Biology, Computer Science or Statistics. The Bioinformatics officer will aid in the analysis of single-cell RNAseq, whole-genome sequencing and data from spatial technologies of prostate cancer samples. The overall goal of our team is to understand the heterogeneity of advanced prostate cancer to develop novel treatments and biomarkers. We collaborate widely with clinicians and our projects are strongly translational.

Job website: http://petermac.mercury.com.au/ViewPosition.aspx?id=QCtZLjKpJ1A=&jbc=seek

Contact name: Anna Trigos

Contact email: anna.trigos@petermac.org

Senior Research Officer – Sequencing Bioinformatics @ VIC

Position title: Senior Research Officer – Sequencing Bioinformatics

Employer: Walter and Eliza Hall Institute of Medical Research

Closing date: 29 April 2021

Brief position description: As part of an ambitious 5-year strategy to drive the Institute’s mission to discover new medicines, WEHI Genomics is investing in platforms, staff and R&D across all advanced genomics technologies. Our Senior Sequencing Bioinformatician (new post) will implement computational workflows for sequencing data QC, data processing and routine analysis across all of our platforms and will undertake novel analyses for new assays and platforms in collaboration with our R&D team. This is an exceptional opportunity for an outstanding applicant able to work efficiently and creatively alongside top wet-lab scientists and analysts.

Job website: https://www.wehi.edu.au/senior-research-officer-sequencing-bioinformatics

Contact name: Rory Bowden

Contact email: bowden.r@wehi.edu.au

Academic Specialist - Bioinformatician @ VIC

Position title: Academic Specialist - Bioinformatician

Employer: The University of Melbourne

Closing date: 19 Apr 2021 11:55 PM AUS Eastern Standard Time

Brief position description: The role of Academic Specialist – Bioinformatics combines technical understanding with an ability to bring together software engineers and different research groups to optimise workflows and usage on a range of platforms, such as Galaxy Australia and Portable Pipelines (JANIS). Key requirements of the role are to engage with key users, support the production and availability of tools and workflows, develop and improve user documentation, deliver training workshops, and liaise with the software development team to design new features for a range of research communities.

Job website: http://jobs.unimelb.edu.au/caw/en/job/904562/academic-specialist-bioinformatician

Contact name: Fiona Kerr

Contact email: fiona.kerr@unimelb.edu.au

Research Software Engineer @ VIC

Position title: Research Software Engineer

Employer: WEHI

Closing date: 05/04/2021

Brief position description: An exciting new opportunity exists for a talented research software engineer to work on software tools for functional genomics.

Understanding human genetic variation is a key component of genomic medicine and our ability to treat disease. Multiplexed Assays of Variant Effect (MAVEs) are a family of experiments that allow researchers to simultaneously measure the impact of many thousands of genetic variants in parallel. As with all new approaches for scientific data generation, high-quality data analysis software is an essential.

This is a software engineering role within a computational research group, working in collaboration with international scientists who are generating and using MAVE data. Experience with genomics, biochemistry or bioinformatics data analysis is beneficial but not required.

The successful applicant will have strong software engineering and software development experience, as well as excellent communication and interpersonal skills. The role may require working directly with researchers outside of WEHI, including software developers at other sites who are contributing to this and related projects.

This role is available as local or fully remote.

Job website: http://www.wehi.edu.au/research-software-engineer

Contact name: Alan Rubin

Contact email: alan.rubin@wehi.edu.au

Computational Biology Lead @ NSW

Position title: Computational Biology Lead

Employer: Garvan Institute of Medical Research

Closing date: 30/4/2021

Brief position description: The Garvan Institute of Medical Research brings together world-leading clinicians and basic and translational researchers to break down barriers between traditional scientific disciplines and find solutions to disease. Founded in 1963, Garvan’s mission is to harness all the information encoded in our genome to better diagnose, treat, predict and prevent disease.

Our scientists work across four intersecting research themes: medical genomics, epigenetics, and cellular genomics; diseases of immunity and inflammation; cancer; and diseases of ageing affecting bone, brain and metabolism. In addition, three major Centres: The Kinghorn Centre for Clinical Genomics, the Garvan-Weizmann Centre for Cellular Genomics, and the Centre for Population Genomics.

The Opportunity

Through the generous and long-term support of Snow Medical, the Genomic Medicine Lab is launching an ambitious program to understand the clinical impact of both inherited and acquired genetic variation. Drawing upon three core strengths of the Garvan Institute, our focus is to use large-scale population, clinical, and cellular genomics to understand, predict, treat, and prevent disease. A key interest is understanding the impact of clonal haematopoiesis and somatic mutation in diseases of inflammation, ageing, and blindness.

An integral part of our program will be the manipulation of large-scale genomic and clinical datasets, and the application of statistical models to understand the impact of inherited and acquired genetic variation in disease risk.

The Computational Biology Lead will be responsible for developing an analysis strategy for germline and somatic variation calling across very large and diverse genomic datasets, for developing pipelines for clinical association analyses, and for working closely with colleagues in the Centre for Population Genomics (led by Dr Daniel MacArthur) to implement these at scale.

This will be a leadership role, with the opportunity to supervise a team and lead the production of high-impact publications. We are interested in recruiting a talented early career researcher with a commitment to research in the field, with a view to supporting their development as a successful independent researcher.

This will initially be a two year full-time role with a high possibility to extend and is a unique opportunity to develop leadership skills in a new and well-supported environment, performing research with a high potential for clinical impact.

Salary will be commensurate with relevant experience, starting at $96,324 AUD plus 14% superannuation and salary packaging benefits. We are open to sponsoring exceptional international applicants.

Key Responsibilities

Working closely with team members and colleagues in the Centre for Population Genomics and Kinghorn Centre for Clinical Genomics to develop and implement plans for the processing and analysis of germline and somatic variants in large-scale genomic and clinical datasets, and to develop a broader scientific strategy for the team as a whole.

Developing and maintaining computational pipelines, infrastructure, and resources across cloud-based platforms and/or on-premises hardware.

Producing rigorous empirical results, generating publication-quality images and text, and leading the production of peer-reviewed publications.

Building and co-supervising a team of students and junior staff with diverse skills across computational biology.

Presenting research methods and results at national and international conferences.

Producing and submitting fellowship and other funding applications.

About You

In order to be successful in this position, you will demonstrate the following key skills and attributes:

A PhD in computational biology, statistical genetics, cancer genomics, computer science, or a related field with at least 2 to 3 years of relevant postdoctoral research experience

Strong computational and statistical skills, including comfort with complex scientific programming, ideally in R and Python. Direct experience with cloud computing platforms (e.g. GCP, AWS) and large genomic datasets (e.g. UK Biobank, FinnGen) is a plus.

Highly autonomous and self-motivated: able to define and manage the execution of strategies for analysis across a wide range of technical areas, from basic sequence quality control through to analysis of large genomic and clinical datasets.

Excellent written communication skills: demonstrated ability to lead the production of manuscripts, grant and ethics applications, and technical reports.

Excellent verbal communication skills, with an ability to effectively represent the research team internally and externally, including the presentation of research outcomes at national and international conferences.

Highly collaborative: able to build and maintain relationships within and between teams, and comfortable engaging in complex discussions remotely through the use of collaborative tools (e.g. Google Docs/Sheets/Slides, Zoom, Slack). Demonstrated supervisory experience in a research environment a plus.

A problem-solving mentality: able to navigate complex technical obstacles, and work effectively with other team members and colleagues to solve them when needed.

How to Apply

To apply for this position, please submit your application with a CV and cover letter stating why you are interested in this role, along with copies of relevant qualifications/academic transcripts and details of at least two referees. We are reviewing applications as they are received.

Visa sponsorships can be considered for exceptional international applicants. If you think you’re the right person for this role, we’d love to hear how your capabilities, achievements and experience set you apart. For any further questions about this role please reach out to talent@garvan.org.au

Job website: http://garvan.wd3.myworkdayjobs.com/en-US/garvan_institute/job/Sydney/Computational-Biology-Lead_PRF5853-1

Contact name: Michelle Earle

Contact email: talent@garvan.org.au

Bioinformatician post-doc @ University of Minnesota

Position title: Bioinformatician post-doc

Employer: University of Minnesota

Closing date: Soon after selecting good candidate

Brief position description: Bioinformatics:
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https://hr.myu.umn.edu/jobs/ext/339331

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https://hr.myu.umn.edu/jobs/int/339331

Job website: http://hr.myu.umn.edu/jobs/ext/339331

Contact name: SUNIL MOR

Contact email: kumars@umn.edu